| Segunda Division | 1 | 2008-08-30 | HOME | Xerez | 0-1 |
| Segunda Division | 2 | 2008-09-07 | AWAY | Girona FC | 3-0 |
| Segunda Division | 3 | 2008-09-13 | HOME | CD Castellon | 0-0 |
| Segunda Division | 4 | 2008-09-20 | AWAY | Club Gimnastic de Tarragona | 1-1 |
| Segunda Division | 5 | 2008-09-28 | HOME | SD Eibar | 3-1 |
| Segunda Division | 6 | 2008-10-04 | AWAY | CD Tenerife | 3-1 |
| Segunda Division | 7 | 2008-10-11 | HOME | SD Huesca | 1-3 |
| Segunda Division | 8 | 2008-10-18 | AWAY | Celta Vigo | 2-2 |
| Segunda Division | 9 | 2008-10-25 | AWAY | FC Elche | 0-0 |
| Segunda Division | 10 | 2008-11-02 | HOME | Albacete Palomie | 1-2 |
| Segunda Division | 11 | 2008-11-09 | AWAY | FC Salamanca | 2-0 |
| Segunda Division | 12 | 2008-11-15 | HOME | Cordoba | 2-2 |
| Segunda Division | 13 | 2008-11-23 | AWAY | Rayo Vallecano | 0-0 |
| Segunda Division | 14 | 2008-11-30 | HOME | Levante UD | 0-2 |
| Segunda Division | 15 | 2008-12-06 | AWAY | Real Sociedad | 1-0 |
| Segunda Division | 16 | 2008-12-13 | HOME | Las Palmas | 1-2 |
| Segunda Division | 17 | 2008-12-20 | AWAY | Real Zaragoza | 3-0 |
| Segunda Division | 18 | 2009-01-03 | HOME | Real Murcia | 0-2 |
| Segunda Division | 19 | 2009-01-10 | AWAY | Hercules Alicante CF | 1-2 |
| Segunda Division | 20 | 2009-01-18 | HOME | Deportivo Alaves | 0-2 |
| Segunda Division | 21 | 2009-01-25 | AWAY | Sevilla Atletico | 2-3 |
| Segunda Division | 22 | 2009-02-01 | AWAY | Xerez | 2-0 |
| Segunda Division | 23 | 2009-02-08 | HOME | Girona FC | 1-1 |
| Segunda Division | 24 | 2009-02-15 | AWAY | CD Castellon | 2-0 |
| Segunda Division | 25 | 2009-02-22 | HOME | Club Gimnastic de Tarragona | 1-3 |
| Segunda Division | 26 | 2009-03-01 | AWAY | SD Eibar | 1-2 |
| Segunda Division | 27 | 2009-03-07 | HOME | CD Tenerife | 2-2 |
| Segunda Division | 28 | 2009-03-15 | AWAY | SD Huesca | 0-1 |
| Segunda Division | 29 | 2009-03-21 | HOME | Celta Vigo | 2-2 |
| Segunda Division | 30 | 2009-03-29 | HOME | FC Elche | 0-3 |
| Segunda Division | 31 | 2009-04-05 | AWAY | Albacete Palomie | 0-2 |
| Segunda Division | 32 | 2009-04-12 | HOME | FC Salamanca | 0-0 |
| Segunda Division | 33 | 2009-04-19 | AWAY | Cordoba | 2-1 |
| Segunda Division | 34 | 2009-04-26 | HOME | Rayo Vallecano | 2-0 |
| Segunda Division | 35 | 2009-05-02 | AWAY | Levante UD | 2-0 |
| Segunda Division | 36 | 2009-05-10 | HOME | Real Sociedad | 1-2 |
| Segunda Division | 37 | 2009-05-16 | AWAY | Las Palmas | 0-1 |
| Segunda Division | 38 | 2009-05-23 | HOME | Real Zaragoza | 0-3 |
| Segunda Division | 39 | 2009-05-30 | AWAY | Real Murcia | 3-1 |
| Segunda Division | 40 | 2009-06-06 | HOME | Hercules Alicante CF | 1-2 |
| Segunda Division | 41 | 2009-06-13 | AWAY | Deportivo Alaves | 1-0 |
| Segunda Division | 42 | 2009-06-20 | HOME | Sevilla Atletico | 3-3 |
